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GrainGenes Probe Report: TraesCS1B01G434500

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS1B01G434500
Locus	TraesCS1B01G434500.1
URL	Pfam PF01728 [ Show all 17 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A1J3GK38|A0A1J3GK38_NOCCA Human Readable Description: Ribosomal RNA large subunit methyltransferase E Pfam IDs Description: PF01728: FtsJ-like methyltransferase; PF11861: Domain of unknown function (DUF3381); PF07780: Spb1 C-terminal domain InterPro IDs Description: IPR002877: Ribosomal RNA methyltransferase FtsJ domain; IPR012920: Ribosomal RNA methyltransferase, Spb1, C-terminal; IPR015507: Ribosomal RNA large subunit methyltransferase E; IPR024576: Ribosomal RNA methyltransferase Spb1, domain of unknown function DUF3381; IPR028589: AdoMet-dependent rRNA methyltransferase, Spb1; IPR029063: S-adenosyl-L-methionine-dependent methyltransferase GO IDs Description via InterPro: GO:0001510 BP: RNA methylation; GO:0005634 CC: nucleus; GO:0006364 BP: rRNA processing; GO:0008168 MF: methyltransferase activity; GO:0008649 MF: rRNA methyltransferase activity; GO:0031167 BP: rRNA methylation; GO:0032259 BP: methylation
Type	Genomic
Sequence	TraesCS1B01G434500.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring