Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS1B01G273000

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS1B01G273000
Locus	TraesCS1B01G273000.2
URL	Pfam PF00313 [ Show all 12 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A088FZS5|A0A088FZS5_CICAR Human Readable Description: Cold shock protein Pfam IDs Description: PF00313: 'Cold-shock' DNA-binding domain; PF00098: Zinc knuckle InterPro IDs Description: IPR001878: Zinc finger, CCHC-type; IPR002059: Cold-shock protein, DNA-binding; IPR011129: Cold shock domain; IPR012340: Nucleic acid-binding, OB-fold; IPR019844: Cold-shock conserved site GO IDs Description via InterPro: GO:0003676 MF: nucleic acid binding; GO:0003677 MF: DNA binding; GO:0006355 BP: regulation of transcription, DNA-templated; GO:0008270 MF: zinc ion binding
Type	Genomic
Sequence	TraesCS1B01G273000.1 TraesCS1B01G273000.2
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring