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GrainGenes Probe Report: TraesCS1B01G271100

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS1B01G271100
Locus	TraesCS1B01G271100.1
URL	Pfam PF02518 [ Show all 26 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A1D5SWF2|A0A1D5SWF2_WHEAT Human Readable Description: DNA topoisomerase 2 Pfam IDs Description: PF02518: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PF00204: DNA gyrase B; PF01751: Toprim domain; PF16898: C-terminal associated domain of TOPRIM; PF00521: DNA gyrase/topoisomerase IV, subunit A InterPro IDs Description: IPR001154: DNA topoisomerase II, eukaryotic-type; IPR001241: DNA topoisomerase, type IIA; IPR002205: DNA topoisomerase, type IIA, subunit A/C-terminal; IPR003594: Histidine kinase-like ATPase, C-terminal domain; IPR006171: TOPRIM domain; IPR013506: DNA topoisomerase, type IIA, subunit B, domain 2; IPR013757: Type IIA DNA topoisomerase subunit A, alpha-helical domain; IPR013758: DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta; IPR013759: DNA topoisomerase, type IIA, central domain; IPR013760: DNA topoisomerase, type IIA-like domain; IPR014721: Ribosomal protein S5 domain 2-type fold, subgroup; IPR018522: DNA topoisomerase, type IIA, conserved site; IPR020568: Ribosomal protein S5 domain 2-type fold; IPR024946: Arginine repressor C-terminal-like domain; IPR031660: C-terminal associated domain of TOPRIM GO IDs Description via InterPro: GO:0003677 MF: DNA binding; GO:0003918 MF: DNA topoisomerase type II (ATP-hydrolyzing) activity; GO:0005524 MF: ATP binding; GO:0006259 BP: DNA metabolic process; GO:0006265 BP: DNA topological change
Type	Genomic
Sequence	TraesCS1B01G271100.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring