Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS1A01G378600

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS1A01G378600
Locus	TraesCS1A01G378600.1
URL	Pfam PF04055 [ Show all 12 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A199WAV6|A0A199WAV6_ANACO Human Readable Description: Oxygen-independent coproporphyrinogen-III oxidase-like protein Pfam IDs Description: PF04055: Radical SAM superfamily InterPro IDs Description: IPR004559: Coproporphyrinogen III oxidase, oxygen-independent related; IPR006638: Elongator protein 3/MiaB/NifB; IPR007197: Radical SAM; IPR013785: Aldolase-type TIM barrel GO IDs Description via InterPro: GO:0003824 MF: catalytic activity; GO:0004109 MF: coproporphyrinogen oxidase activity; GO:0005737 CC: cytoplasm; GO:0006779 BP: porphyrin-containing compound biosynthetic process; GO:0051536 MF: iron-sulfur cluster binding; GO:0055114 BP: oxidation-reduction process
Type	Genomic
Sequence	TraesCS1A01G378600.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring