Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS1A01G215400

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS1A01G215400
Locus	TraesCS1A01G215400.1
URL	Pfam PF12624 [ Show all 14 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|F4JNE2|F4JNE2_ARATH Human Readable Description: Pleckstrin homology (PH) domain-containing protein Pfam IDs Description: PF12624: N-terminal region of Chorein or VPS13; PF16908: Vacuolar sorting-associated protein 13, N-terminal; PF16910: Repeating coiled region of VPS13; PF00169: PH domain; PF06101: Plant protein of unknown function (DUF946); PF06650: SHR-binding domain of vacuolar-sorting associated protein 13 InterPro IDs Description: IPR001849: Pleckstrin homology domain; IPR009291: Vacuolar protein sorting-associated protein 62; IPR009543: Vacuolar protein sorting-associated protein 13, SHR-binding domain; IPR011993: PH domain-like; IPR026854: Vacuolar protein sorting-associated protein 13, N-terminal domain; IPR031642: VPS13, repeated coiled region; IPR031646: Vacuolar protein sorting-associated protein 13, second N-terminal domain
Type	Genomic
Sequence	TraesCS1A01G215400.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring