Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS1A01G110900

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS1A01G110900
Locus	TraesCS1A01G110900.1
URL	Pfam PF01591 [ Show all 20 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A1E5W418|A0A1E5W418_9POAL Human Readable Description: 6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase Pfam IDs Description: PF01591: 6-phosphofructo-2-kinase; PF00300: Histidine phosphatase superfamily (branch 1) InterPro IDs Description: IPR001345: Phosphoglycerate/bisphosphoglycerate mutase, active site; IPR002044: Carbohydrate binding module family 20; IPR003094: Fructose-2, 6-bisphosphatase; IPR013078: Histidine phosphatase superfamily, clade-1; IPR013079: 6-phosphofructo-2-kinase; IPR013783: Immunoglobulin-like fold; IPR013784: Carbohydrate-binding-like fold; IPR027417: P-loop containing nucleoside triphosphate hydrolase; IPR029033: Histidine phosphatase superfamily GO IDs Description via InterPro: GO:0003824 MF: catalytic activity; GO:0003873 MF: 6-phosphofructo-2-kinase activity; GO:0005524 MF: ATP binding; GO:0006000 BP: fructose metabolic process; GO:0006003 BP: fructose 2, 6-bisphosphate metabolic process; GO:0008152 BP: metabolic process; GO:0030246 MF: carbohydrate binding; GO:2001070 MF: starch binding
Type	Genomic
Sequence	TraesCS1A01G110900.1 TraesCS1A01G110900.2
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring