Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: TraesCS1A01G106300

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS1A01G106300
Locus	TraesCS1A01G106300.1
URL	Pfam PF04997 [ Show all 15 ]
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|A0A1D5S237|A0A1D5S237_WHEAT Human Readable Description: DNA-directed RNA polymerase subunit Pfam IDs Description: PF04997: RNA polymerase Rpb1, domain 1; PF00623: RNA polymerase Rpb1, domain 2; PF04983: RNA polymerase Rpb1, domain 3; PF05000: RNA polymerase Rpb1, domain 4; PF11523: Protein of unknown function (DUF3223) InterPro IDs Description: IPR000722: RNA polymerase, alpha subunit; IPR006592: RNA polymerase, N-terminal; IPR007066: RNA polymerase Rpb1, domain 3; IPR007080: RNA polymerase Rpb1, domain 1; IPR007083: RNA polymerase Rpb1, domain 4; IPR021602: Protein of unknown function DUF3223 GO IDs Description via InterPro: GO:0003677 MF: DNA binding; GO:0003899 MF: DNA-directed 5'-3' RNA polymerase activity; GO:0006351 BP: transcription, DNA-templated
Type	Genomic
Sequence	TraesCS1A01G106300.1 TraesCS1A01G106300.2
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring