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GrainGenes Probe Report: S2269949

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
S2269949
Locus
Fr-A2
S2269949
Reference
ReferenceSieber AN et al. (2016) Copy number variation of CBF-A14 at the Fr-A2 locus determines frost tolerance in winter durum wheat Theoretical and Applied Genetics 129:1087-1097.
Type
KASP
PCR primers
5'-FAM-tail-ACTGCAGCGAG-GATTCCCA-3'
5'-AGCCACCTCTGAGATGCCGCTT-3'
5'-HEX-tail- CTACTGCAGCGAGGATTC-CCG-3'
5'-AGCCACCTCTGAGATGCCGCTT-3'
Specificity
FAM-tail primer is specific for the frost susceptible allele of Fr-A2, while the HEX-tailed allele is specific to the frost tolerant allele