Query (optional)   in Class  

GrainGenes Probe Report: AM24

[Submit comment/correction][What is a probe?]

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
AM24
Reference
ReferenceLi CD et al. (2000) The development of oat microsatellite markers and their use in identifying relationships among Avena species and oat cultivars Theoretical and Applied Genetics 101:1259-1268.
General Remarks
Insert contains repeat (AAG)5..(TCA)5
Known repeat = L2 repeat with 69 % identity over 59 base pairs
Among 20 oat cultivars, 1 allele was found.
Type
PCR
SSR
PCR primers
5'GTT ATT GAT TTC CTG ATG TAG AGA
5'AGA GCC AAG AAA GCA ACT G
SSR size
170
Amplification Conditions
Average melting temperature (degrees C) = 45
Source Species
Avena sativa
Source Germplasm
Ogle (oat)