Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: AM17

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	AM17
Reference	Li CD et al. (2000) The development of oat microsatellite markers and their use in identifying relationships among Avena species and oat cultivars Theoretical and Applied Genetics 101:1259-1268.
General Remarks	Insert contains repeat (AC)13 Polymorphic in Kanota/Ogle and Marion/Terra. Among 20 oat cultivars, 2 alleles were found, polymorphic information content (PIC) = 0.48.
Type	PCR SSR
PCR primers	5'CGA GAT TTC GGT GTA GAC 5'CCG GGA ATT AAC GGA GTC
SSR size	250
Amplification Conditions	Average melting temperature (degrees C) = 44
Source Species	Avena sativa
Source Germplasm	Ogle (oat)