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GrainGenes Probe Report: CD490475-5D

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
CD490475-5D
Data at Wheat_SNP
CD490475-5D
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP G>A;T>A;INS at 65;433;437, 2
SNP G>A;INS;G>A;T>A at 65;197, 1;222;433
SNP INS;G>A;DEL at 236, 1;261;482-483
Reference sequence TTAGTTAGCAGCCAGTTAATTCCGAAGCTAGCTGATCTAAAACAGCAAGCAGAAAAATAATTTAGAAGATCGAGAAACCAACCCAGTCATGGTGTCCTCTGGCCTCTCTCAGACCGTACGTTATCCCAGAGTACACTCCGGCTGCCAATCCTGCCGGAAGAACAACACATATTAGAAGCTGTGCTAAAAAAATGTTTGAGATGAAATAATTAGTTAACGCTGAAATGAATACTAACCCCACTGAATGGCCTCCTTGCTTGCCGATTTAACCTGCAAATCAAGGTGCGAGCTAGTGGTCAGAGGGAGAAGAACTAGCTATCGGAACAGATAATTTGAGCCTTGAAAAGCAAGCCTGGTAGCTTACCACTGCGTCGAGCGACTTCTGGCCGTCATCCCCTGTGGAGAGTCGATTTCATCAGCTCAGGCTCAACGTAAACAGAGAAAAGAGCTACTGTCC
Reference sequence CTGTTCTTCTGCAGCAGCATCAAGGTTAACAAGCACAAGTTAGTTAGCAGCCAGTTAATTCCGAAGCTAGCTGATCTAAAACAGCAAGCAGAAAAATAATTTAAAAGATCGAGAAACCAACCCAGTCATGGTGTCCTCTGGCCTCTCTCAGACCGTACGTTATCCCAGAGTACACTCCGGCTGCCAATCCTGCCGGAAGAACAACACATATTAGAAGCTGTGCTAAAAAAATGTTTGAGATGAAATAATTAGTTAACGCTGAAATGAATACTAACCCCACTGAATGGCCTCCTTGCTTGCCGATTTAACCTGCAAATCAAGGTGCGAGCTAGTGGTCAGAGGGAGAAGAACTAGCTATCGGAACAGATAATTTGAGCCTTGAAAAGCAAGCCTGGTAGCTTACCACTGCGTCGAGCGACTTCTGGCCGTCATCCCCTGTGGAGAGTCGATTTCATCAGCTCAGGCTCAACGAAAACAGAGAGAAAAGAGCTACTGTCCAGAAAAGAGGTATCACCTCTGGCGCTGGAGAAATGGCTCCTCTTGGCGGTGCTGTCCAGCCCCGTCGAGTCTCCTCCCATCCCTTCGACGGCGACGAA
Type
EST
SNP
PCR primers
CD490475_cpF1 CCCTGCTATCGCACTGTTCT
CD490475D_R1 ACCTCTTTTCTGGACAGTAGC
Linkage Group
5D
Source Species
Triticum aestivum