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GrainGenes Probe Report: CD454870-7D

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
CD454870-7D
Data at Wheat_SNP
CD454870-7D
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP C>T;G>A at 145;193
SNP G>A;T>A;C>T;A>G;C>G at 59;121;145;168;219
SNP A>G;G>A;A>G;C>T;C>G;G>A;C>G;T>G at 106;162;271;294;322;441;442;447
Reference sequence TCATCCATGTTTAGATTTTAGATATAACAAAAATGTCACAATTAAGATATTACTCACCGACTTCCTTATCTATCAATTCTTGCAAGCCAGATGGTTGGCAAACTTTTCGTTCTGCATCGGTTGTAACAATAGCAGTTCGATCTTCCACTTTAACCTGAACAACAGTCACATTATTATGGAGACAAAATAGTCGTAAGAAGCTTGACCAAGAAGTTAAACAAATAGTGCATTACTAAAATAACAACTTACCTTAAGTTGTTTACTTGGTAGATCAGTATATAGGTCACACCAATTCTGGAATGACCATCTCTTATGCTGTAACACAGCCTCCACCAAAA
Reference sequence GCGTATACTCTTACCACATCCTCAGTTCCAGATGGCCGGACAAAGCATCGCCCGTGAGAGTAATTAACTGCAATAGAATGCATAGTTTTTAGTACATTTTCATTCATCCATGTTTAGATTTTAGATATAACAAAAATGTCACAATTAAGATATTACTCACCGACTTCCTTATCTATCAATTCTTGCAAGCCAGATGGTTGGCAAACTTTTCGTTCTGCATCGGTTGTAACAATAGCAGTTCGATCTTTCACTTTAACCTGAACAACAGTCACATTATTATGGAGACAAAATAGCCGTAAGAAGCTTGACCAAGAAGTTAAACAAATAGTGCATTACTAAAATAACAACTTACCTTAAGTTGTTTACTTGGTAGATCAGTATATAGGTCACACCAATTCTGGAATGACCATCTCTTATGCTGTAACACAGCCTCCACCAAAGCCATTTCCACT
Type
EST
SNP
PCR primers
CD454870_cpR1 AAGTGGAATGCTTTTGGTGG
CD454870D_F1 GTACATTTTCATTCATCCATGTTT
Sequence
NSFT03P2_Contig8238
Linkage Group
7D
Source Species
Triticum aestivum