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GrainGenes Probe Report: CD454041-7D

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
CD454041-7D
Data at Wheat_SNP
CD454041-7D
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP G>A;DEL;A>G at 55;185;199
SNP A>G at 53
SNP T>C at 144
Reference sequence TGATAACAAAGTTGCATAACCTTTACATGGTTTTTTTTTCTAATGTAAGATCAGTAAAGAATACCCCTTTGGTTCTTCTCAACTAACTCTTTGCATGTTCTTCTATGCCAATTTTCATATATAAATGATATGCTTTGTCCTTGTGTGAGCAAAGAATTAACTGCGATTAAGTAAAATTAGAAAGAAATCTAGTATTGTCAAACCTCTTCCAGTGCCAACATTATAAATGCCAACTCTACTAGGCTCTGCCTTGTTGAGTGCTTTCACATGAGCATCTACTAGATCTGTGACATCAATGTAGTCTCTTATGCAGGTTCCATCAGCTGTAGGATAATCTATCCCTTTAACCTGCAATTGATTTGTCAAAATCCATCAGCTTCACCCCTTACTCACTGATTGCACTTAAAACACAGGCGTGCTACTTACTATGAAGCAGAGAGCATAAGCATTATATACCATATTAATAATATAATCCAAACATGCACAACTTGATACGCGAACCTGCTCCAGTCAATATACAAGAAAAAAAATACCTTCAATCCTGAAATGACTCCTA
Reference sequence TGGCCTCCTGCTGAGGTACTCAATTTTGATGTCAACCCCAGTTGCCTGCTTGCAGGCATCGACAAACTCCTTAACGGAACGGCCTGAATAGAGGAGATGGATATGGGCATGATTTGACAGTACAACTTCAGTTAATTCTTCAAGCATGATAACAAAGTTGCATAACCTTTACATGGTTTTTTTTTCTAATGTAAGATCAGTAAAGAATACCCCTTTGGTTCTTCTCAACTAACTCTTTGCATGTTCTTCTATGCCAATTTTCATATATAAATGATATGCTTTGTCCTTGTGTGAGCAAAGAATTAACTGCGATTAAGTAAAATTAGAAAGAAATCTAGTATTGTCAAACCTCTTCCAGTGCCAACATTATAAATGCCAACTCTACTAGGCTCTGCCTTGTTGAGTGCTTTCACATGAGCATCTACTAGATCTGTGACATCAATGTAGTCTCTTATGCAGGTTCCATCAGCTGTAGGATAATCTATCCCTTTAACCTGCAATTGATTTGTCAAAATCCATCAGCTTCACCCCTTACTCACTGATTGCACTTAAAACACAGGCGTGCTACTTACTATGAAGCAGAGAGCATAAGCATTATATACCATATTAATAATATAATCCAAACATGCACAACTTGATACGCGAACCTGCTCCAGTCAATATACAAGAAAAAAAATACCTTCAATCCTGAAATGACTCC
Type
EST
SNP
PCR primers
CD454041_cpR1 TGCTTTGATGCAGCACTAGG
CD454041D_F2 ATTCTTCAAGCATGATAACAAAG
Sequence
NSFT03P2_Contig9440
Linkage Group
7D
Source Species
Triticum aestivum