Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: BQ162119-5D

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	BQ162119-5D
Data at Wheat_SNP	BQ162119-5D
Reference	Akhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks	SNP INS at 81, 1 SNP C>A;A>T;T>G;G>A;INS at 509;510;511;512;645, 1 Reference sequence TCGAAGCTCACGTCATCCGTGAATATCACGTCTCCTCCGGGAGCAGGGTTATCGGAGTTATATGCCACTGATGGATTTAGCTTTGCCAGTAAGAACCGAGCCTGCAGGTTCAGACGAAAATGATATTTACCTCTTTCTTCAACACAAGTAATTATAACAAACCAGTGCCGAAACTAAGTAGTACCAGATTTTCATCAATAAATCAGAAGTACAAAAGGAATTACCTGAGATCCATATTGATCGCAAACAACCAAACGGGGAACAGGAAACCGCTCTTTGATTATGCTATCAGATTCCTCGTGTGGAGCTTTCAACAACTGCGCAAACACCTGAACATAATGCAAAAGAAGATTAAGCGCTGGAAGGCACTCCACTTTGCAATCTAGATCAAGTCTTTCATGATCGATAAACTAGACTCGTGTGCATCTCAGTCGACCAACATTATTCTGCCATAGCTTGACGAGCAATTACCTCGTGGCCTTCTTGATCTTGGTAGCCAGCATTCCGCCATGAACCACCTGAAGCTCACGTCATCTGTGAATATCACGTCTCCTCCGGGAGCAGGGTTATCAGAGTTATATGTCACGGATGGATTTAGCTTTGCCAGTAAAAACCGAGCCTGCAGGTTCAGACGAAAATGATATTATCTATTTCTTCAATACTCTAATAAAATCACAAGTGCAGAAGAATTACCTGAGATCCATATTGATCACAAACAACCAAACGGGGCACAGGAAACCGCTCTTTGATTATGGCATCAGATTCGTCATGTGGAGCTTTTAACAACTGGGCAAACGCCTGAAAATCATGCAAGACGCAAGATTAAGCACTGGAAGGCACACTGGATGAAGTCCTTCATGATCGATGAACTAGACTCGTGTGCATCTCAGTAAACCAACATTATTCTGCAGTATAGCTGACAAACAATTACCTCGTGGCCTTCTTGATCTTGGTAACCAGCCTTTCGCCATTGTGCAATGGTTATCCCATG Reference sequence AGGGTTATCAGAGTTATACGTCACGGATGGATTTAGCTTTGCCAGTAAAAACCGAGCCTGCAGGTTCAGACGAAAATGATATTATCTATTTCTTCAATACTCTAATAAAATCACAAGTGCAGAAGAATTACCTGAGATCCATATTGATCACAAACAACCAAACGGGGCACAGGAAACCGCTCTTTGATTATGGCATCAGATTCGTCATGTGGAGCTTTTAACAACTGGGCAAACGCCTGAAAATCATGCAAGACGCAAGATTAAGCACTGGAAGGCACACTGGATGAAGTCCTTCATGATCGATGAACTAGACTCGTGTGCATCTCAGTAAACCAACATTATTCTGCAGTATAGCTGACAAACAATTACCTCGTGGCCTTCTTGATCTTGGTAACCAGCCTTTCGCCATTGTGCAATGGT
Type	EST SNP
PCR primers	BQ162119_cpR1 CATGGGATAACCATTGCACA BQ162119D_F2 GCAGGGTTATCAGAGTTATACGT
Linkage Group	5D
Source Species	Triticum aestivum