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GrainGenes Probe Report: BM136927-2D

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BM136927-2D
Data at Wheat_SNP
BM136927-2D
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP C>A;T>C;T>A;G>T;C>G;G>A;G>A at 16;25;48;49;52;536;548
SNP G>T at 388
Reference sequence TCTGGTCAAGTTGTCCGAAATGACTGCAGTACAGATTGTTGTTCATATGATCTGAAGTTGGGCAAAGTGAACTGTGACAACTGTTGTGGGTACAGCATCCACTACACCCCTCATATCGGCATTGCCATTCTTTTCCACTTATTTGGATGCTACTGGGCTACTCAATTCTTCATGGCATGCTCTGCAACTGTGGTTGCTGGATCAGTTGCTTCTTACTACTGGGCGCGTGGCGAAATATCTGTAAGTACAGCACAAAAGAGTCAGAACTTCAACTATTTTTACTAAATGGGTGCTCTTTAATTTACTCCATACTTTTGCATTATCACCATTTACTGACAATTGAAGCCATTCTGGTGCAGCATGATATACCGTTTTTCAGTGTTGTCTCTTCGCTCAAGCGGCTGATGCGTTACAACCTTGGATCTGCTGCCATAGGCTCGCTTGTTGTGTCTGCTGTTGAGTGGGTGCGGTTTATACTAGAATGCCTTCGCCGCAAGTTGAAGCTGGTCGGTTCTGCTGGGGAGAGCTGCTTTGGGAAAGTGTCATCGTCCTCGTCTCA
Reference sequence CCACCTCTTCAGCTCTGGTCAAGTTGTCCGAAATGACTGCAGTACAGATTGTTGTTCATATGATCTGAAGTTGGGCAAAGTGAACTGTGACAACTGTTGTGGGTACAGCATCCACTACACCCCTCATATCGGCATTGCCATTCTTTTCCACTTATTTGGATGCTACTGGGCTACTCAATTCTTCATGGCATGCTCTGCAACTGTGGTTGCTGGATCAGTTGCTTCTTACTACTGGGCGCGTGGCGAAATATCTGTAAGTACAGCACAAAAGAGTCAGAACTTCAACTATTTTTACTAAATGGGTGCTCTTTAATTTACTCCATACTTTTGCATTATCACCATTTACTGACAATTGAAGCCATTCTGGTGCAGCATGATATACCGTTTGTCAGTGTTGTCTCTTCGCTCAAGCG
Type
EST
SNP
PCR primers
BM136927_cpF1 CCACCTCTTCAGCTCTGGTC
BM136927D_R1 CGCTTGAGCGAAGAGACAACA
Sequence
NSFT03P2_Contig989
Linkage Group
2D
Source Species
Triticum aestivum