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GrainGenes Probe Report: BG314548-3D

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BG314548-3D
Data at Wheat_SNP
BG314548-3D
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP T>C;C>G;T>C;A>G at 104;114;290;333
SNP T>C;C>G;T>C;A>G at 90;100;276;319
Reference sequence TTCCGCGGATCCCAGCGTAGCCTCAGCGCCTTCGCGCGCTGGCTCGCGCTCTTCTTCACGCACGTCAGCCTCCGCGACCCCGTTGTCGCTGTGAGTACACCCCAGACCCCACATAGGAGTTGTTTTGTGTTTTCAGTGAATTCTTAATTCTACCTCGATGTGCTAGGTCTTTGATGGGGCAGGCGGGAACGAGTACCGGAGGCGGCTGCTGCCGTCCTACAAAGCGCACCGGACTCGCGGCGTAGGCACCGGTGCCGATTCACGCGTGGTTGACGTGCTCCGCGAGTGCAATGTTCCGGTGGGTGGACCAGAGATGACAGACACAGTTGTGTTAATTGCGCAATCCACAATGCTCTCTTTGTCACAATTCTTTCTGATCCTAATGCTTTTGTGAGCGGCAAACTCAGGTTGTGCAAGTCGATGGATACGAGGCAGATGATGTAGTGGCTACCTTGACAGAGCAAGTATTACAGAAAGGTTATAGAGTTGTCATTGCC
Reference sequence AACCCTTAATATGCTTCCGCGGATCCCAGCGTAGCCTCAGCGCCTTCGCGCGCTGGCTCGCGCTCTTCTTCACGCACGTCAGCCTCCGCGACCCCGTTGTCGCTGTGAGTACACCCCAGACCCCACATAGGAGTTGTTTTGTGTTTTCAGTGAATTCTTAATTCTACCTCGATGTGCTAGGTCTTTGATGGGGCAGGCGGGAACGAGTACCGGAGGCGGCTGCTGCCGTCCTACAAAGCGCACCGGACTCGCGGCGTAGGCACCGGTGCCGATTCACGCGTGGTTGACGTGCTCCGCGAGTGCAATGTTCCGGTGGGTGGACCAGAGATGACAGACACAGTTGTGTTAATTGCGCAATCCACAATGCTCTCTTTGTCACAATTCTTTCTGATCCTAATGCTTTTGTGAGCGGCAAACTCAGGTAGTGCAAGTCGAATTG
Type
EST
SNP
PCR primers
BG314548_cpF1 TCAACCCTATATGCTTCCGC
BG314548D_R1 CGTATCCATCGACTTGCACTAC
Sequence
NSFT03P2_Contig5397
Linkage Group
3D
Source Species
Triticum aestivum