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GrainGenes Probe Report: BG313685-5D

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	BG313685-5D
Data at Wheat_SNP	BG313685-5D
Reference	Akhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks	SNP T>G at 57 SNP T>G;G>A;INS at 57;82;426, 1 SNP G>A;INS;T>C;T>G;G>A at 68;459, 2;468;740;765 Reference sequence ATTTCAGATTGCAGTTAACTTTCTGTTTTGAGTTTCAGTAATTGTAGAATTCACATTCCATGATACTTCTGAAGTTCTGATGGTGGCACACAAGTTTTACATCTCAAAGCAAAGTCAAACTGTTTGTTCTAAGCTAGTATATCTTTCTTTATTAGAACTGAGATATAATTACCTATTTAATTATCTAGCTGGATCACATCATCATGGATGTAGATGAATGAACTAACACAATTTAGCTGTGCTGGCTGCTTATGCTGTGGCATATTTGAGCCACCGCCAAGTTAACTTTCTGTATCGAGTTTCAGTAATTGTAGAATTCACATGCCATGGTACTTCTGATAGTGGCACACAAGTTTACATCCTGAAACAAAGTTGAACTGTCTGTTCTAAGTTAGTGTCTCTCCTTATTGGAAATGCACACGAATAAATTACCTATTTAAGATCTAAATCGATCACATCATAAGGGATGTTGATGAATGAACTAACACATTTTAGCTGTGCTGACTGCTTATGCTGTGGTATATTTGAACTGCATTCTTAATTTCTTGTTGTTTTGATTTAATTCATTTACTTTTTCAGGGGAAAATTG Reference sequence GTTATAGATTTTTACTTGCTATAAAGAAAAGATGAGATTGTTCTAAATTTGATATTGCTTGAGTTCTGCTGTTCTGTTGTCCAAACACACATTTTATATGCACTAGAACATAACCATTCCCAAATAATCCAGATACTGAAACTGTGTATATAATAAGCTACTGAGCTTGTAAGGCAGTTGTGCTCACAATTTTTATCTTGAGAAAACGTAATAGTCTTGTGTCTGATAACTCGATAGATAGAAAAAGTAATATGTTCAACGGGCCTTTGAATAGACCGAAACACCGACAACACGAACCACGCCTTAAGCGGTAAGCTCCGCCGGTGATGACACCTGTAGGCCAGTCACACCTGCCTTACCCTACAAACTTGCCTTTGTCTAGCAGCATAACGATGCCGGGTTTGTCACTGTTGAAGGCAGCAGCGTTCGCTGCTTCCAGATGATGATGGTGGATTATCAGACAGATTTGGTGTCGTAATAATGCACGATACATTATCACACAGACAGATTTGATGGCAATGGTGATGGATTGCAAGATTAGGTGTTTAAAAGGCATGTCAACAATGTTATGTTAATTTGTGGAGCCTAGACCAGTTCCTGTGCATGCCAGGTTATGCTTGAACTTTTATCGGGGGTCTGCTCTCATCCAATTAGAGCACTAGCATTCTCAGTTTCGAGTTTAATTTCAAGATTGCAGTTAACTTTCTGTTTTGAGTTTCAGTAATTGTAGAATTCACATTCCATGATACTTCTGAAGTTCTGATGGTGGCACACAAGTTTTACATCTCAAAGCAAAGTCAAACTGTTTGTTCTAAGCTAGTATATCTTTCTTTATTAGAACTGAGATATAATTACCTATTTAATTATCTAGCTGGATCACATCATCATGGATGTAGATGAATGAACTAACACAATTTAGCTGTGCTGGCTGCTTATGCTGTGGCATATTTGAGCCACCGCCAAGTTAACTTTCTGTATCGAGTTTCAGTAATTGTAGAATTCACATGCCATGGTACTTCTGATAGTGGCACACAAGTTTACATCCTGAAACAAAGTTGAACTGTCTGTTCTAAGTTAGTGTCTCTCCTTATTGGAAATGCACACGAATAAATTACCTATTTAAGATCTAAATCGATCACATCATAAGGGATGTTGATGAATGAACTAACACATTTTAGCTGTGCTGACTGCTTATGCTGTGGTATATTTGAACTGCATT
Type	EST SNP
PCR primers	BG313685_cpR1 TTGAAGCAACAATTTTCCCC BG313685D_F1 CTCTCATCCAATTAGAGCAGTA
Sequence	NSFT03P2_Contig1605
Linkage Group	5D
Source Species	Triticum aestivum