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GrainGenes Probe Report: BG263076-5D

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BG263076-5D
Data at Wheat_SNP
BG263076-5D
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP C>T at 153
SNP DEL;DEL;G>A at 10;22;660
SNP C>T at 198
Reference sequence TGATGAGGATACTATGTGTAAGTATCTTATATAGATGCTTCTTTTAGGTCTACTCTTCTTTTCAACGTTTAGTCATGTTTATTAGTTAATTTTGATTTTGAATCGTTTAATCTTTGACTTTACATTCGAACTACTTAAAAATATTGCACGGTTACACCACATTCCTTCAAATATGTCTGGACATAGCATGATGAAGAATTATCCTATAGAACTTCAATAGAAATATGAGTAGTTGTCGGCTATTGTTGCATTAGTTTCTTTATTATAGTTTTCATCAGTTTACACTCATTCATGTTTCTCCTCCTTGGGCATTGTATCTCATCTTTTCAGTACAACATTGATTTTCTTAATGAGGAGAAAACTCTATTTGTGTTGGCCCCTTCATAATTGTCAAAGAATTTTGTTTTTGTACACTATTGTACACCTTACCAGTTCATCGAAACAACATCAGTCAATTATTCTAATATCCATAATATGTCTTGTTTCTTAGAGGTGGGACATTTACTTTCACCTTCCAAGTATCTCCTTCCTACCCTCACGAGGCTCCGAAGGTCAAGTGCAAGACTAAGGTAACACAATCTGACTCCTGTCAATCATCATCATAAGTTGGTTATTGCTAATGTAGTAACTTTCAGGTTTACCATCCTAATATTGACCTAGAAGGAAATGTCTGCCTGA
Reference sequence CCCAAATGGAAAGGATGATCTCATGAACTTTGAGGCCACTCTACGTCCTGATGAAGGATACTATGTGTAAGTATCTTATATAGATGCTTCTTTTAGGTCTACTCTTCTTTTCAACGTTTAGTCATGTTTATTAGTTAATTTTGATTTTGAATCGTTTAATCTTTGACTTTACATTCGAACTACTTAAAAATATTGCACGGTTACACCACATTCCTTCAAATATGTCTGGACATAGCATGATGAAGAATTATCCTATAGAACTTCAATAGAAATATGAGTAGTTGTCGGCTATTGTTGCATTAGTTTCTTTATTATAGTTTTCATCAGTTTACACTCATTCATGTTTCTCCTCCTTGGGCATTGTATCTCATCTTTTCAGTACAACATTGATTTTCTTAATGAGGAGAAAACTCTATTTGTGTTGGCCCCTTCATAATTGTCAAAGAATTTTGTTTTTGTACACTATTGTACTCCTTACCAGTT
Type
EST
SNP
PCR primers
BG263076_cpF1 TTCCCAAATGGAAAGGATGA
BG263076D_R1 GTTTCGATGAACTGGTAAGGAGT
Sequence
NSFT03P2_Contig3997
Linkage Group
5D
Source Species
Triticum aestivum