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GrainGenes Probe Report: BF478499-3D

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BF478499-3D
Data at Wheat_SNP
BF478499-3D
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP C>T;G>A at 180;224
SNP G>A at 222
SNP G>A at 224
Reference sequence CCGTCTCCTCGCCGCAGAGCACGGCCTCCTCGCCGGCCATCTCCTCATGCCGCCCCGCCGCCTGCGGCCGCTTCCTGGCCTGCGTGGCCGCTTCTCAGAAGAGGAGCCTGATGGTGGTGTCCGGCTCTGACGGGAGGGGAGTGGCTCCGGTGAAGTCGGGCGGCTTGGAGACGGCCACGACGGGAGCCGACGAGGTGGAAGCGCCCACAGCGGCGGTGGCGGTGACCGGGCAGGTCACGGAGGTCTGCAAGGACACCTTCTGGCCAATTGTCAAGGCAGCAGGGGAGAAGCCCGTCGTCCTCGACATGTACACCCAATGGTACTGTGCAAGCCCCATACATTTCTTCGTTTCAGCTCTTCTTCACTGATGAACTACTGTCTCAATCCCACATCTTCCTGCCATACAAGCTAGACCAGATTATTTAGAGATGCATGTATATTGTTATAATCCAGATCAGATGTCATCCCGCAGCACAGTGATGAAATTTCCTTGTCTGCAGGTGCGGCCCTTGCAAAGTTATTGCACCA
Reference sequence TTCCGTCTCCTCGCCGCAGAGCACGGCCTCCTCGCCGGCCATCTCCTCATGCCGCCCCGCCGCCTGCGGCCGCTTCCTGGCCTGCGTGGCCGCTTCTCAGAAGAGGAGCCTGATGGTGGTGTCCGGCTCTGACGGGAGGGGAGTGGCTCCGGTGAAGTCGGGCGGCTTGGAGACGGCCACGACGGGAGCCGACGAGGTGGAAGCGCCCACAGCGGCGGTGGCGGTGACCGGGCAGGTCACGGAGGTCTGCAAGGACACCTTCTGGCCAATTGTCAAGGCAGCAGGGGAGAAGCCCGTCGTCCTCGACATGTACACCCAATGGTACTGTGCAAGCCCCATACATTTCTTCGTTTCAGCTCTTCTTCACTGATGAACTACTGTCTCAATCCCACATCTTCCTGCCGTACAAGCTAGACAAGAA
Type
EST
SNP
PCR primers
BF478499_cpF1 GTTACGCCTCTCCGTCTCCT
BF478499D_R1 AATAATCTGGTCTAGCTTGTACGG
Sequence
NSFT03P2_Contig11640
Linkage Group
3D
Source Species
Triticum aestivum