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GrainGenes Probe Report: BF201235-2B

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BF201235-2B
Data at Wheat_SNP
BF201235-2B
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP T>C;A>G;G>A at 382;388;394
SNP DEL;C>T;DEL at 516;522;521
SNP G>A;T>C;A>G;G>A at 286;382;388;394
Reference sequence TGGAGTTTGAGAACGCCAGAGTTCTTATAACTGATCAGAAGATCACAAGCATAAAGGAAATCATTCCACTTCTGGAGCAGACTACACAGTTGAGATGCCCGCTGTTTATTGTAGCTGAGGACATCACTGGTGAAGCTTTGGCAACTCTTGTTGTTAACAAGCTCAGAGGTATTATTAATGTTGCGGCGATCAAAGCCCCAAGTTTCGGTGAGCGGCGGAAGGCTGTCCTTCAGGATATTGCCATCGTGACAGGTTCGTCCTGCAACCAGTACTGACGTTCTTTTCGTTCTTAGTTTTGTTTACAAGGAGTGCCCATTTTTTTTTATCTTGTTATCTTTCCTGATTTCTTAAACATTTACTTATCCTACAACTACTTTCAGGTGCTGAATACCTGGCGAAGGATCTTGGTCTGTTGGTTGAGAATGCAACAGTAGACCAACTTGGGACAGCAAGGAAAATCACAATTCATCAGACTACGACCACC
Reference sequence GCCAGAGTTCTTATAACTGATCAGAAGATCACAAGCATAAAGGAAATCATTCCACTTCTGGAGCAGACTACACAGTTGAGATGCCCGCTGTTTATTGTAGCTGAGGACATCACTGGTGAAGCTTTGGCAACTCTTGTTGTTAACAAGCTCAGAGGTATTATTAATGTTGCGGCGATCAAAGCCCCAAGTTTCGGTGAGCGGCGGAAGGCTGTCCTTCAGGATATTGCCATTGTGACAGGTTCGTCCTGCAACCAATACAAACGTTCTTTTCGTTCTTAGTTTTGTTTATAAGGAGTGCCCATTTTTTTTTATCTTGTTATCTTTCCTGATTTCTTAAACATTTACTTATCCTACAACTACTTTCAGGTGCTGAATACCTGGCGAAGGATCTTGGTCTGTTGGTTGAGAATGCAACAGTAGACCAACTTGGGACAGCAAGGAAAATCACAATTCATCAGACTACAACAACCCTCATAGCAGATGCGGCTAGCAAAGACGAGATCCAGGCGAGGGTTGCACAGCTAAAGAAGGAGCTTTCTGAAACTGATTCCATCTATGACTCTGAGAAATTGGCTGAGAGGATTGCC
Type
EST
SNP
PCR primers
BF201235B_R1 GGGTGGTCGTAGTCTGATGA
BF201235_cpF1 GGAGTTTGAGAACGCCAGAG
Sequence
NSFT03P2_Contig18601
Linkage Group
2B
Source Species
Triticum aestivum