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GrainGenes Probe Report: BE591275-5D

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	BE591275-5D
Data at Wheat_SNP	BE591275-5D
Reference	Akhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks	SNP T>C;C>G;DEL;C>T;A>G;DEL at 351;420;706;713;715;822 SNP C>A;A>G; at 485;715 SNP A>T;T>C;C>G;DEL;C>T;A>G;DEL at 65;466;535;821;828;830;937 Reference sequence GGAGCCATCTCCTAGTAAAATAGTGAAATCAAATTCTACTTCGTTGGACGAGATGAAGAGGATAATGGATGGTTCGACCTATTATGATGTTTTGGGCATCCCTCGGAGCAAAAGCATCAATCAGATCGAATTGAAAAAGGAATACAGAAAACTGGTAATAGACAACAACACTTTAAGCTGAACGATCATCCATATTTCTGTTCCTTATTGTCCTGGTGCATTTTGTCTGTCTAGGCAGTTCTTGTCCATCCTGATAAAAACATGGGGAATCCATTGGCGTGCGAGTCATTCAAGAAGCTTCAGTCAGCTTTTGAGGCAAGTACTTGGGAGTATATGCGAGCTTTGGGCTTTCTTTCGTAGAGTTTTCTCAAATCTGACAGTGTATCGTTTCTTGATCACAAATGTGTTATTTGACTCTTCATAAAGGTAACCGGTCTAGTCGTACCTCCATGCAGGTACTCTCAGATTTAACGAAGAAAAATGGCTATGATGAACAGCTGAGGAAAGAAGAATCGCGGCAAATGACTCAGAGATCACGTGTTGTCTCTCAACCGGTGGGTTCTTGTCCTTGTAAATAACTAAATACGGAATGTAGATGTCTTTGATTTGCACATGATCTTGTTAAGTTTTGGAGCAGACAATGTGATCTCTAGTTTTCTGCACATTCCCCTTTGTAATTTACTTTATGATATTATTATCCTTTGGAGCTCATCCATATTGAAAAATTCCTCAGATACCACGTGCTACCCCTCAACAGATACTTTTATTCTGTTAGTATGGAATTTAGCCAGTTATCTTCTATTGTTTTGTTACTATGGAATTCAGTTAGTTATCTTCTGTATGTAACCTGGTCAATTTCTTAAACAAGGTGATTTATGCACGACCCTCCTGTTTTGGACAATCTTGTTTGATACTGTTTTCTTTGTATAACTCATTTATAATTGAAAAATAAAGTCAA Reference sequence ATGCCTTCTTTCGTGGCTGTGAATATCCTCCTGCTCCTGAAAGTGAACCAGAGACTGTGTCGTCAGCAAAGCCCTTTTGCGCAGCACCTACCCAAGATGTGTTACATGTACAGAAGGAGCCATCTCCTAGTAAAATAGTGAAATCAAATTCTACTTCGTTGGACGAGATGAAGAGGATAATGGATGGTTCGACCTATTATGATGTTTTGGGCATCCCTCGGAGCAAAAGCATCAATCAGATCGAATTGAAAAAGGAATACAGAAAACTGGTAATAGACAACAACACTTTAAGCTGAACGATCATCCATATTTCTGTTCCTTATTGTCCTGGTGCATTTTGTCTGTCTAGGCAGTTCTTGTCCATCCTGATAAAAACATGGGGAATCCATTGGCGTGCGAGTCATTCAAGAAGCTTCAGTCAGCTTTTGAGGCAAGTACTTGGGAGTATATGCGAGCTTTGGGCTTTCTTTCGTAGAGTTTTCTCAAATCTGACAGTGTATCGTTTCTTGATCACAAATGTGTTATTTGACTCTTCATAAAGGTAACCGGTCTAGTCGTACCTCCATGCAGGTACTCTCAGATTTAACGAAGAAAAATGGCTATGATGAACAGCTGAGGAAAGAAGAATCGCGGCAAATGACTCAGAGATCACGTGTTGTCTCTCAACCGGTGGGTTCTTGTCCTTGTAAATAACTAAATACGGAATGTAGATGTCTTTGATTTGCACATGATCTTGTTAAGTTTTGGAGCAGACAATGTGATCTCTAGTTTTCTGCACATTCCCCTTTGTAATTTACTTTATGATATTATTATCCTTTGGAGCTCATCCATATTGAAAAATTCCTCAGATACCACGTGCTACCCCTCAACAGATACTTTTATTCTGTTAGTATGGAATTTAGCCAGTTATCTTCTATTGTTTTGTTACTATGGAATTCAGTTAGTTATCTTCTGTATGTAACCTGGTCAATTTCTTAAACAAGGTGATTTATGCACGACCCTCCTGTTTTGGACAATCTTGTTTGATACTGTTTTCTTTGTATAACTCATTTATAATTGAAAAATAAAGTCAAT
Type	EST SNP
PCR primers	BE591275D_F1 CCTGAGAGTGAACCAGAGACTBE446058-5D PCR_primers BE591275_cpR1 ATACGCCTGGACTCCTCAGA BE591275_cpR1 GGCAAGTAGCCCACTCAGAT
Sequence	NSFT03P2_Contig12277
Linkage Group	5D
Source Species	Triticum aestivum