Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: BE591275-5A

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	BE591275-5A
Data at Wheat_SNP	BE591275-5A
Reference	Akhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks	SNP INS at 705, 1 SNP C>T;A>G;T>A;G>T at 10;146;285;812 SNP G>A;A>C at 240;543 Reference sequence TTCGTTGGACGAGATGAAGAGGATAATGGATGGTTTGACCTATTATGATGTTTTGGGCATCCCTCGGAGCAAAAGCATCAATCTGATCGAATTGAAAAAGGAATACAGAAAACTGGTAATAGACAACAGCACTTTAAGCTGAACGATCATCCATGTTTCTGTTACTTATTTTCCTGGTGCATTTTGTCTGTCTAGGCAGTTCTTGTCCATCCTGATAAAAACATGGGGAATCCATTGGCGTGCGAGTCATTCAAGAAGCTTCAGTCAGCTTTTGAGGCACGTACTTGGGAGTATATGCCAACTTTGGGCTTTCTTTCGTAGAGTTTTCTCAAATCTGACAGTGTATCATTTCTTGATCACAACTGTGTTATTTGACTCTTGATAAAGGTAACCGGTCTAGTCGTACCTCCATGCAGGTACTCTCAGATTTAACGAAGAAAAATGGCTATGATGAACAGCTGAGGAAAGAAGAATCACGGCAAATGACTCAGAGATCACGTGTTGTCTCTCAACCGGTGGGTTCTTGTCCTTGTAAATAACTAAATATGGAATGTAGATGTCTTTGATTTGCACATGATCTTGTTAAGTTTGGGAGCACACAATGCGATCTCTAGTATTCTGCACATTCCCCTTTGTAATGTACCTTCTGATATTATTATCCTTTGGAGCTCATTCGTATTGAAAAATCCCTCAGATACCACGTGCTACCCCTCAACAGATACTCTTATTCTGTTAGTATGGAATTTAGTCAGTTATCTTCTATTGTTTTGTCACTACGGAATTCAGTTAGTTATCTTCTGTATGTAACCTGGTCAATTTCTTAAACAAGGTGATTTATGCGCGACCCTCCTGTTTTGGACAATCTTGTTTGATACTGTTTTCTTTGTATAACTCATTTATAATTGAAAAATGAAGTCAATTGATAAATAT Reference sequence CTGATCCAGCCACGGATGCCTTCTTTCGTGGCTGTGAATATCCCCCTGCTCCTGAAAGTGAACCAGAGACCGTGTCGTCTGCAAAGCCCTTTTGCGCAGCACCTACCCAAGACGTGTTACATGTACAGAAGGAGCCATCTCCTAGTAAAATAGTGAAATCAAACTCTACTTCGTTGGACGAGATGAAGAGGATAATGGATGGTTTGACCTATTATGATGTTTTGGGCATCCCTCGGAGCAAAAGCATCAATCTGATCGAATTGAAAAAGGAATACAGAAAACTGGTAATAGACAACAGCACTTTAAGCTGAACGATCATCCATGTTTCTGTTACTTATTTTCCTGGTGCATTTTGTCTGTCTAGGCAGTTCTTGTCCATCCTGATAAAAACATGGGGAATCCATTGGCGTGCGAGTCATTCAAGAAGCTTCAGTCAGCTTTTGAGGCACGTACTTGGGAGTATATGCCAACTTTGGGCTTTCTTTCGTAGAGTTTTCTCAAATCTGACAGTGTATCATTTCTTGATCACAACTGTGTTATTTGACTCTTGATAAAGGTAACCGGTCTAGTCGTACCTCCATGCAGGTACTCTCAGATTTAACGAAGAAAAATGGCTATGATGAACAGCTGAGGAAAGAAGAATCACGGCAAATGACTCAGAGATCACGTGTTGTCTCTCAACCGGTGGGTTCTTGTCCTTGTAAAAACTAAATATGGAATGTAGATGTCTTTGATTTGCACATGATCTTGTTAAGTTTGGGAGCACACAATGCGATCTCTAGTATTCTGCACATT
Type	EST SNP
PCR primers	BE591275A_F1 CGCAGCACCTACTCAAGAC BE591275_cpR1 ATACGCCTGGACTCCTCAGA BE591275_cpR1 GGCAAGTAGCCCACTCAGATBF292081-5B PCR_primers
Sequence	NSFT03P2_Contig12277
Linkage Group	5A
Source Species	Triticum aestivum