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GrainGenes Probe Report: BE585781-1D

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BE585781-1D
Data at Wheat_SNP
BE585781-1D
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP A>G;T>C;T>C at 118;153;221
SNP A>G;A>G at 149;217
SNP T>C at 133
Reference sequence TAGCCACTCCCATTTATGATCTTGTACCTCGTTTCCCAATCCAGTTTTTGACGTTTTTCTTCATCTGATTTTCCATCAATAATTAGAAAATAGTATAATTAAGATCAGTGTGATGTTACATTCTTATTTCAATCTGTGGAGCAAATGGACAATAGAATCATGGCTCAACTAGTTACCGAAAAGGATCAGGTCGAGGCTTCGGTTAGGAATAAACTCATAGATGAGCAGCCTCTCTTGTTGCTCCAAGCAGACACCGATTAGTCTAACAAGGTTCTTGTGCTTCAGTTTCGCAACCAAGGCGAGCTCATTCTTCAGCTCCTCCACTCCTTGTGTTGAGCTCTTGGAGAGTCTCTTCACAGCGATTCTCAT
Reference sequence GATGAGATCGCTGTGAAGAGACTCTCCAAGAGCTCAACACAAGGAGTGGAGGAGCTGAAGAATGAGCTCGCCTTGGTTGCGAAACTGAAGCACAAGAACCTTGTTAGACTAATCGGTATCTGCTTGGAGCAACAAGAGAGGCTGCTCATCTATGAGTTTATTCCTAACCGAAGCCTCGACCTGATCCTTTTCGGTAACTAGTTGAGCCATGATTCTATTGTCCATTTGCTCCACAGATTGAAATAAGAATGTAACATCACACTGATCTTAATTATACTATTTTCTAATTATTGATGGAAAATCAGATGAAGAAAAACGTCAAAAACTGGATTGGGAAACGAGGTACAAGATCATAAATGGAGTGGCTCGAGGCCTGCAGTACCTCCATGAAGACTCTCAGCTCAAAGTAGTACATCGTGACCTCAAAGCGAGCAATGTCTTG
Type
EST
SNP
PCR primers
BE585781_cpF1 CGATGAGATCGCTGTGAAGA
BE585781D_F2 AGCCACTCCATTTATGATCTTGT
Sequence
NSFT03P2_Contig4940
Linkage Group
1D
Source Species
Triticum aestivum