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GrainGenes Probe Report: BE518446-3A

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BE518446-3A
Data at Wheat_SNP
BE518446-3A
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP T>G;C>T;G>A;C>T;INS;A>G;T>G;G>A;C>A;T>G;C>T;G>A;G>T at 5;6;8;9;8, 4;32;372;418;439;454;471;528;550
SNP T>A;A>G at 132;137
Reference sequence TTGCGGTGTTCAAAATGATACACGACATTCCTTTTTTCTCTTTCATAATATTTTGGTACTTTTGCTTTGAAATTGGAAATGCACGCTGTTATGGCCGGTACTATGGCATTGTTTACTTGACTGTATGCACATTTGGAACCTTGATAATTCATATATATAAATCTACTTTTTTTGATCAGGTAATGAAGTTTGAAGATCTAAAAGAGCTGGGCAGTGAATCTGCTGTGAAGGTGTGCACACACTCGTCTATGTTAGATCTGTATCAGTTGCCTTACTTTTGATCTTTAAACTCAACGTTGCCATGGATTGCAGGCTGCTGGGAAGTACAGGCAGGAAGGGAAGACTAATGTGGTGC
Reference sequence CTGATCTGCCAAAAGTAAGGCAACTGATACAAATCTAACATAGACGAGTGTGTGCACACCTTCACAGCAGATTCACTGCCCAGCTCTTTTAGATCTTCAAACTTCATTACCTGATCAAAAAAAGTAGATTTATATATATGAATTATCAAGGTTCCAAATGTGCATACAGTCAAGTAAACAATGCCATAGTACCGGCCATAACAGCGTGCATTTCCAATTTCAAAGCAAAAGTACCAAAATATTATGAAAGAGAAAAAAGGAATGTCGTGTATCATTTTGAACACCGCAAACAGAAATACATCAAGTTAACATAATGAAAGGAGCTTCAGTAAACATCGAGATTTGAAAAAAAAAAACATGCCTAAGCATCATGTACCTGGGGGACAACACTTTGGCATGATGAAGTGCAAATAGTAAGAATAGCAACAGTTAAACTACCCTGTCAACTAAAAATGCCACAGTTCATTTATCCCAAATAAAGGAATTGTGTCTAGCTTTTTCAAAAAGGACTCTACCTCAGCACATATGAAGCCTCTTTCAAAATCAGTGGGAATTGCACCAGCAGCTTGCGAAGCTTTACTTTG
Type
EST
SNP
PCR primers
BE518446A_F1 TTGCGGTGTTCAAAATGATAC
BE518446_cpR1 GCACCACATACGTCTTCCCT
Sequence
NSFT03P2_Contig16993
Linkage Group
3A
Source Species
Triticum aestivum