Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: BE517711-5A

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	BE517711-5A
Data at Wheat_SNP	BE517711-5A
Reference	Akhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks	SNP G>C at 561 SNP C>T at 555 Reference sequence ATTTTATATGGTAGTTAGTAGTATCTAGGTGTTTTTCTTAATGTGTTGGGTTTTTTTTTTGCGGGGTAATGTGTTGTTTGCTAGCTATTAAAGTTTGACAATTGTTTTGGCTATATAGGTGGAAGGGAGAAGGCACCTGCTGCTTTCTGCAGAAAGGCTCTAACCTCCACTGACCGGTTTGAGATGTGGGGAGATGGTCTGCAGACTAGATCCTTCACATTTATTGATGAATGTGTGGAGGGTGTCCTCAGGTATTTTTTTTACCAACTTATGTTTATATAGTCCAGTATTTCTTATTTTTTGCTATCAAATCCGGTACTGGTATGCCTACTTTTTTGCTTTTGCTGAAATATGCCTTAAATTAGCATGGAATAAATTTTGCATGAATTACACTATTTAGTGTGGATAATAAGACAATTTGTGCTGAGATGACAATTAATGGACGGCAGCTTTAGTTCTGATTTCCAAGAGAAGCATCAGTTGTTTTAGCTTTCTAGACTTAAAAGTTTCATATGAGATGTTGATTTCCATTCGACAGAATTGCAATTTGAGAACCACCTGTTGGTAGATTAGTTTCTTAATTGAGTGTGATGGCCCAGCAAGCAATTTTATCTCACAACTATTCCAAAAGCTGCAGTGATTTAATTTACTTTAGGATAGGAAACTCAAAAGTTCTATTGCAAA
Type	EST SNP
PCR primers	BE517711A_R1 CTCATCAGGAACACATGTACG BE517711_cpF1 GGATTGGTCGCTTTCACAAT
Sequence	NSFT03P2_Contig18196
Linkage Group	5A
Source Species	Triticum aestivum