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GrainGenes Probe Report: BE500311-4D

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BE500311-4D
Data at Wheat_SNP
BE500311-4D
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP INS;G>A;T>C;T>C;T>A;T>G;T>G;T>A;INS;INS;INS;A>T at 13, 1;380;384;385;386;387;389;474;483, 1;640, 1;656, 1;667
SNP A>T;DEL at 285;294
SNP G>A;A>T at 191;481
Reference sequence TGTTATTTTTTTTACTTTAGTTATTGTGATTTTGCTAATAGAATCAACTGGCAAACTTTCTTATGTTTTTACCCCACAAATACTGCTAGTCTGCTATGCTGGTGCAGACCATTTCTCTACCATGTTTTTATGTCGTGCCGCTCTTCATCTTTTAGTTATATGGGTAATTATATATTTTTCAACATCGCTTCTTGTTTGGTTCCCAGGGTGTTGCTGCTGTTTCCACTACTGCAGTTTTGAGTACAAAGAGTCCGACAGCAACTTCACCTACTCAGGTACATGTTATTCATTCCTAGTTATTTATTGAATATCTGTTGGTTTGTGATAAACGGAGACATAGTATTAGTATATCGAATACTCAGAACACAATGGTTGTTATGTGCTTTTTTTCAACTTAGTTGGCATCCTGGCTGCTGCTTTCTTGTCAACCTTTACATGCTAGTATTGATTTATTTGATCATCTTCTTACAAGCTAATCCTTGATATGAATACACGTGGTTGTTGCTAATTTGGGCATTTAATAAAAACACATGCTAACAAGATTGAGGAATTGGTTATTTCTAATGTACAATCCTGATTACTACTTGTCGATATGCTGATTTACCGACTCTGTCTCCCTTTGCTTCAGGCTACTGTATCACAATCTCACAAGGGACTCACAAGATCAAGCAG
Reference sequence TCTTGTTTGGTTCCCAGGGTGTTGCTGCTGTTTCCACTACTGCAGTTTTGAGTACAAAGAGTCCGACAGCAACTTCACCTACTCAGGTACATGTTATTCATTCCTAGTTATTTATTGAATATCTGTTGGTTTGTGATAAACGGAGACATAGTATTAGTATATCGAATACTCAGAACACAATGGTTGTTATGTGCCCAGTGTCAACTTAGTTGGCATCCTGGCTGCTGCTTTCTTGTCAACCTTTACATGCTAGTATTGATTTATTTGATCATCTTCTTACAAGCAAATCCTTGAATATGAATACACGTGGTTGTTGCTAATTTGGGCATTTAATAAAAACACATGCTAACAAGATTGAGGAATTGGTTATTTCTAATGTACAATCCTGATTACTACTTGTCGATATGCTGATTTACCGACTCTGTCTCCCTTTGCTTCAGGCTACTGTATCAACAATCTCACAAGGGACATCACAAGATCAAGCAGAGGAAACAACTACGCTAGAAAGCAATCCTGAATCGGTGCCACAAACACCACCTCCGAAGGGTGGAAATCTGGGAC
Type
EST
SNP
PCR primers
BE500311_cpR1 GCACTGATGGTCCCAGATTT
BE500311D_F2 AACATCGCTTCTTGTTTGGTTC
Sequence
NSFT03P2_Contig12080
Linkage Group
4D
Source Species
Triticum aestivum