Query (optional)   in Class  

GrainGenes Probe Report: BE500311-4B

[Submit comment/correction][What is a probe?]

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
BE500311-4B
Data at Wheat_SNP
BE500311-4B
Reference
ReferenceAkhunov ED et al. (2010) Nucleotide diversity maps reveal variation in diversity among wheat genomes and chromosomes. BMC Genomics 11:702.
General Remarks
SNP DEL at 76
SNP T>A;T>A at 380;549
SNP A>T;T>C;INS;DEL;INS;C>T;DEL;G>A;C>T;A>T at 77;79;129, 1;232;237, 1;375;387-390;415;465;566
Reference sequence TTGCTTTCTGTGTAGTTGTTTCCTCTGCTTGATCTTGTGATGTCCCTTGTGAGATTGTTGATACAGTAGCCTGAAGCAAAGGGAGACAGAGTCGGTAAATCAGCATATCGACAAGTAGTAATCAGGATTGTACATTAGAAATAACCAATTCCTCAATCTTGTTAGCATGTGTTTTTATTAAATGCCCAAATTAGCAACAACCACGTGTATTCATATTCAAGGATTAGCTTGTAAGAAGATGATCAAATAAATCAATACTAGCATGTAAAGGTTGACAAGAAAGCAGCAGCCAGGATGCCAACTAAGTTGACACTGGGCACATAACAACCATTGTGTTCTGAGTATTCGATATACTAATACTATGTCTCCGTTTATCACATACCAACAGATATTCAATAAATAACTAGGAATGAGTGACATGTACCTGAGTAGGTGAAGTTGCTGTCGGACTCTTCGTACTCAAAACTGCAGTAGTGGAAACAGCAGCAACACCCTGGCAACCAAACAAGAAGCGATGTTGAAAAATATATAATTACCCATATAACTAATAGATGAAGAGCTGCACGACATAAAAACATGGTAGAGAAATGGTCTGCACCAGCATAGCAGACTAGCAGTATTTGTGGGGGAAAACATAAGAAAGTTT
Reference sequence TGAAGCACTCGAAGACATGGTTTCACTTGCTCCTTCCATTCTTATCAAGGTGAGCTGTGAGCTGTTATTTTTTTTTAATTTTGGTTATTGTGATTTTGCTAATAGAATCAACTGGCAAACTTTCTTATGTTTTTCCCCACAAATACTGCTAGTCTGCTATGCTGGTGCAGACCATTTCTCTACCATGTTTTTATGTCGTGCAGCTCTTCATCTTTTAGTTATATGGGTAATTATATATTTTCAACATCGCTTCTTGTTTGGTCGCCAGGGTGTTGCTGCTGTTTCCACTACTGCAGTTTTGAGTACGAAGAGTCCGACAGCAACTTCACCTACTCAGGTACATGTTATTCATTCCTAGTTATTTATTGAATATCCGTTGGTTTGTGATAAACGGAGACATAGTATTAGTATATCGAATACTCAGAACACAATGGTTGTTATGTGCCCAGTGTCAGCTTAGTTGGCATCCTGGCTGCTGCTTTCTTGTCAACCTTTACATGCTAGTATTGATTTATTTGATCATCTTCTTACAAGCTAATCCTTGAATATGAATACACGTGGTTGTAGCTAATTTGGGCATTTAATAAAAACACATGCTAACAAGATTGAGGAATTGGTTATTTCTAATGCACAATCCTGATTACTACT
Type
EST
SNP
PCR primers
BE500311B_R3 CATATCAACAAGTAGTAATCAGGATTGTG
BE500311_cpF1 GGAGAAGGTTGAAGCACTCG
Sequence
NSFT03P2_Contig12080
Linkage Group
4B
Source Species
Triticum aestivum