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GrainGenes Marker Report: k10215

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Locus	k10215
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 129.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bast46H1016
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/C SNP structure (UNICODE) = AATTCCACCCYAGAAAATCCA Parent 1 SNP sequence = AATTCCACCCTAGAAAATCCA Parent 2 SNP sequence = AATTCCACCCCAGAAAATCCA
Probe for Locus	bast46H1016
Locus	k10215
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative flavonol glucosyltransferase [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - ATTGACCACTGTTCTTGGGC Right 5' - CAACTGCCCACAGACAACC
Sequence	AL511332
PCR size	222