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GrainGenes Marker Report: k09946

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Locus	k09946
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 252
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bast73E0210
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/C SNP structure (UNICODE) = GGCATTGCGCSGCGGCCAACA Parent 1 SNP sequence = GGCATTGCGCGGCGGCCAACA Parent 2 SNP sequence = GGCATTGCGCCGCGGCCAACA
Probe for Locus	bast73E0210
Locus	k09946
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = glycine hydroxymethyltransferase (EC 2.1.2.1) - barley (fragment) emb CAA03953.1 unnamed protein product [Hordeum vulgare subsp. vulgare]
Type	PCR
PCR primers	Left 5' - ACTCGGGGTTTTGAGGAAAC Right 5' - GGGATCACGTCGTCAAGACT
Sequence	BJ549888
PCR size	372