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GrainGenes Marker Report: k08993

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Locus	k08993
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 146.6
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH54H04
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/C SNP structure (UNICODE) = AGTCTTGATAYGATGAAACTT Parent 1 SNP sequence = AGTCTTGATATGATGAAACTT Parent 2 SNP sequence = AGTCTTGATACGATGAAACTT
Probe for Locus	BaH54H04
Locus	k08993
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = cinnamoyl-CoA reductase family [Arabidopsis thaliana] pir D84747 probable cinnamoyl-CoA reductase [imported] - Arabidopsis thaliana
Type	PCR
PCR primers	Left 5' - CAACCAACTTTGGGCATTG Right 5' - AGCTAGGCTTCGCGTTCATA
Sequence	BJ485191
PCR size	386