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GrainGenes Marker Report: k08730

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Locus	k08730
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 112
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH50M01
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = GGATGGACTAYCTCAACCCGG Parent 1 SNP sequence = GGATGGACTACCTCAACCCGG Parent 2 SNP sequence = GGATGGACTATCTCAACCCGG
Probe for Locus	BaH50M01
Locus	k08730
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative light-harvesting chlorophyll a/b binding protein [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - CCTAGCAACAGCAGCACATC Right 5' - CATGGTCGAAATGATAGGGG
Sequence	AJ432207
PCR size	300