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GrainGenes Marker Report: k08695

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Locus	k08695
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 276.1
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH56B06
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/C SNP structure (UNICODE) = TCAGTCCTCAYCAAGTAGCAT Parent 1 SNP sequence = TCAGTCCTCATCAAGTAGCAT Parent 2 SNP sequence = TCAGTCCTCACCAAGTAGCAT
Probe for Locus	BaH56B06
Locus	k08695
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative heat shock protein [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CGAGGGGCAAAGTAACTTCA Right 5' - GGTGTGTGGCATTTGTTGAT
Sequence	BJ552358
PCR size	304