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GrainGenes Marker Report: k08619

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Locus	k08619
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 43.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH48H04
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = CCCCTCCGATYAGCGGATCAT Parent 1 SNP sequence = CCCCTCCGATCAGCGGATCAT Parent 2 SNP sequence = CCCCTCCGATTAGCGGATCAT
Probe for Locus	BaH48H04
Locus	k08619
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBa0094O15.2 [Oryza sativa (japonica cultivar-group)] emb CAE01586.2 OSJNBa0068L06.12 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TGAGCTTTATTCTAGGCGGC Right 5' - GCGCTAAGAGAGTTCATCCG
Sequence	BJ484010
PCR size	350