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GrainGenes Marker Report: k08600

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Locus	k08600
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 118.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH58F04
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/A SNP structure (UNICODE) = CACTCTCCTCRAGATTAAATA Parent 1 SNP sequence = CACTCTCCTCGAGATTAAATA Parent 2 SNP sequence = CACTCTCCTCAAGATTAAATA
Probe for Locus	BaH58F04
Locus	k08600
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBa0041A02.17 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TTTTTCCCTTGACGCCTATG Right 5' - CGACAGCAGAATGGTTGAGA
Sequence	CA014935
PCR size	351