Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k08442

[Submit comment/correction]

Locus	k08442
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 250
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS37D12
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = CTCGGACCCCYGGAGCAGCAG Parent 1 SNP sequence = CTCGGACCCCCGGAGCAGCAG Parent 2 SNP sequence = CTCGGACCCCTGGAGCAGCAG
Probe for Locus	BaGS37D12
Locus	k08442
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = CSLC7 [Oryza sativa]
Type	PCR
PCR primers	Left 5' - CCATCTCACCCGACTCACTT Right 5' - GGCAAGTACGACTACGCCAT
Sequence	BJ468123
PCR size	356