Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k08425

[Submit comment/correction]

Locus	k08425
Type	SNP
Chromosome	7H
Map	Hv-HNxH602-7H 239.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS9H02
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/A SNP structure (UNICODE) = GTCGGCAACCRCATTTCCCTT Parent 1 SNP sequence = GTCGGCAACCGCATTTCCCTT Parent 2 SNP sequence = GTCGGCAACCACATTTCCCTT
Probe for Locus	BaGS9H02
Locus	k08425
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative Rab geranylgeranyl transferase [Arabidopsis thaliana] gb AAM51433.1 putative rab geranylgeranyl transferase [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - TCGAGCGAACAATTCCAATA Right 5' - AAGGTGCTCAGCTCCAAGAC
Sequence	AV920141
PCR size	353