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GrainGenes Marker Report: k08390

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Locus	k08390
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 168.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS32P08
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = CACCACTGCTYGATTGTTCAT Parent 1 SNP sequence = CACCACTGCTCGATTGTTCAT Parent 2 SNP sequence = CACCACTGCTTGATTGTTCAT
Probe for Locus	BaGS32P08
Locus	k08390
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = DegP protease, putative [Arabidopsis thaliana] dbj BAB11638.1 serine protease-like protein [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - AAGTTCACATCGCCCATTTC Right 5' - AACGGTTGAAGGACAAATGC
Sequence	BJ466606
PCR size	435