GrainGenes Marker Report: k08330
Locus
k08330
Type
CAPS
Chromosome
3H
Map
Hv-HNxH602-3H 40.4
[ Show Nearby Loci ]
Map Data
Barley, HN x H602, Sato2009
Species
Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe
BaGS20N02
Reference
Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark
Restriction enzyme used for CAPS analysis = HhaI SNP = -/C SNP structure (UNICODE) = GATCGCTGGG-/CGCTATAGGCA Parent 1 SNP sequence = GATCGCTGGG-GCTATAGGCA Parent 2 SNP sequence = GATCGCTGGGCGCTATAGGCA
Probe for Locus
BaGS20N02
Locus
k08330
Reference
Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks
Best BLAST Hit = NONSPECIFIC LIPID-TRANSFER PROTEIN 4.3 PRECURSOR (LTP 4.3) emb CAA91435.1 lipid transfer protein [Hordeum vulgare subsp. vulgare]
Type
PCR
PCR primers
Left 5' - GGGATCTTTCGACACGGTAA
Right 5' - TCGCAGTGTTTGACTTCGAC
Sequence
AV918368
PCR size
434
GrainGenes Marker Report: k08330
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