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GrainGenes Marker Report: k08323

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Locus	k08323
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 96.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS15C17
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = A/C SNP structure (UNICODE) = GCTGCAACACMAATGGAAAAG Parent 1 SNP sequence = GCTGCAACACAAATGGAAAAG Parent 2 SNP sequence = GCTGCAACACCAATGGAAAAG
Probe for Locus	BaGS15C17
Locus	k08323
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = P0410E03.18 [Oryza sativa (japonica cultivar-group)] dbj BAB21287.1 P0410E03.18 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TAACCTTTCCCATGGCATTC Right 5' - AGCATTAGAAATTGAGGCGG
Sequence	AV920680
PCR size	448