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GrainGenes Marker Report: k08314

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Locus	k08314
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 272.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS4N04
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = A/G SNP structure (UNICODE) = GTTTGCAGCCRTAGTCCATTC Parent 1 SNP sequence = GTTTGCAGCCATAGTCCATTC Parent 2 SNP sequence = GTTTGCAGCCGTAGTCCATTC
Probe for Locus	BaGS4N04
Locus	k08314
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = similar to Arabidopsis thaliana putative chloroplast outer envelope 86-like protein (AC002330) [Oryza sativa]
Type	PCR
PCR primers	Left 5' - TTTCAATGACACACGGGAGA Right 5' - TTCGATAAGGACCAGAACGG
Sequence	AV834130
PCR size	464