Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k08180

[Submit comment/correction]

Locus	k08180
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 88.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS20A10
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/A SNP structure (UNICODE) = GGAAGAGAAARCAN/AAACAN/AAG Parent 1 SNP sequence = GGAAGAGAAAGCANAACANAG Parent 2 SNP sequence = GGAAGAGAAAACAAAACAAAG
Probe for Locus	BaGS20A10
Locus	k08180
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = hypothetical protein~similar to Oryza sativa chromosome 1, P0666G04.18 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - GAAAATTACACGATGGCGGT Right 5' - CGGACAGTGCGACAAGATT
Sequence	AV918143
PCR size	373