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GrainGenes Marker Report: k08165

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Locus	k08165
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 109.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS31B11
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/A SNP structure (UNICODE) = GCAAGGAATTRGAAACAGAAG Parent 1 SNP sequence = GCAAGGAATTGGAAACAGAAG Parent 2 SNP sequence = GCAAGGAATTAGAAACAGAAG
Probe for Locus	BaGS31B11
Locus	k08165
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative prolyl 4-hydroxylase, alpha subunit [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - CTGGCCAATCACAGCTTGTA Right 5' - TGCTCATGCTCGTATCTGCT
Sequence	BJ466191
PCR size	370