GrainGenes Marker Report: k08148
Locus
k08148
Type
CAPS
Chromosome
3H
Map
Hv-HNxH602-3H 57.4
[ Show Nearby Loci ]
Map Data
Barley, HN x H602, Sato2009
Species
Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe
BaGS35A09
Reference
Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark
Restriction enzyme used for CAPS analysis = SacII SNP = A/G SNP structure (UNICODE) = TGGTGGCAACRAGCTCCATCA Parent 1 SNP sequence = TGGTGGCAACAAGCTCCATCA Parent 2 SNP sequence = TGGTGGCAACGAGCTCCATCA
Probe for Locus
BaGS35A09
Locus
k08148
Reference
Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks
Best BLAST Hit = expressed protein [Arabidopsis thaliana] gb AAM13240.1 unknown protein [Arabidopsis thaliana]
Type
PCR
PCR primers
Left 5' - AAGTTTGACTGCGCCATTCT
Right 5' - TGCATCCCTCCGATAATCTC
Sequence
AL509708
PCR size
375
GrainGenes Marker Report: k08148
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