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GrainGenes Marker Report: k08003

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Locus	k08003
Type	SNP
Chromosome	7H
Map	Hv-HNxH602-7H 181.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS22M17
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = -/G SNP structure (UNICODE) = WACCACACAA-/GCGAAGGGCTA Parent 1 SNP sequence = AACCACACAA-CGAAGGGCTA Parent 2 SNP sequence = TACCACACAAGCGAAGGGCTA
Probe for Locus	BaGS22M17
Locus	k08003
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = T-complex protein 1, epsilon subunit (TCP-1-epsilon) (CCT-epsilon) (TCP-K19)
Type	PCR
PCR primers	Left 5' - TGTGTACAAAAATACTTGCCCG Right 5' - GAGTGCAGGATCAAGGGAGA
Sequence	AV918947
PCR size	268