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GrainGenes Marker Report: k07511

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Locus	k07511
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 113.1
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baet16A1002
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/G SNP structure (UNICODE) = TCCGCTGAGCSGCGCTTCTAG Parent 1 SNP sequence = TCCGCTGAGCCGCGCTTCTAG Parent 2 SNP sequence = TCCGCTGAGCGGCGCTTCTAG
Probe for Locus	baet16A1002
Locus	k07511
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative endoxyloglucan transferase [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TGTCCGATAAAAACATCGCC Right 5' - GTGCAAGGAGGGTGCATATT
Sequence	CA016090
PCR size	257