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GrainGenes Marker Report: k06879

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Locus	k06879
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 60
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAL17L15
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/T SNP structure (UNICODE) = CAGTCCGAGCYGCCCCCGCCG Parent 1 SNP sequence = CAGTCCGAGCCGCCCCCGCCG Parent 2 SNP sequence = CAGTCCGAGCTGCCCCCGCCG
Probe for Locus	BaAL17L15
Locus	k06879
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = F14D16.26 [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - GCCATAACCGATGCGTAAGT Right 5' - TCGGTACAATGATTGCTGGA
Sequence	AJ478209
PCR size	361