Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k06872

[Submit comment/correction]

Locus	k06872
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 155.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAL30I11
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/A SNP structure (UNICODE) = TATTGGTCAAMTTTATACTAC Parent 1 SNP sequence = TATTGGTCAACTTTATACTAC Parent 2 SNP sequence = TATTGGTCAAATTTATACTAC
Probe for Locus	BaAL30I11
Locus	k06872
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBa0067K08.18 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TTGGAAAAAGGAAAAGGGCT Right 5' - TGCACTTTTTGCTCTGGATG
Sequence	BJ475903
PCR size	366