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GrainGenes Marker Report: k06857

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Locus	k06857
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 69.6
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAK20B09
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = T/C SNP structure (UNICODE) = CCATCTGTTGYTCCCTCCATT Parent 1 SNP sequence = CCATCTGTTGTTCCCTCCATT Parent 2 SNP sequence = CCATCTGTTGCTCCCTCCATT
Probe for Locus	BaAK20B09
Locus	k06857
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = endo-1,4-beta-glucanase Cel1 [Hordeum vulgare subsp. vulgare]
Type	PCR
PCR primers	Left 5' - TCCAGTGCTCTTCGATCCTT Right 5' - AAGGAGTCAGCCACGAGAAA
Sequence	BJ456192
PCR size	378