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GrainGenes Marker Report: k06543

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Locus	k06543
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 81.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAK26L11
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = C/G SNP structure (UNICODE) = TATACCTGTGSTAGATGTGTG Parent 1 SNP sequence = TATACCTGTGCTAGATGTGTG Parent 2 SNP sequence = TATACCTGTGGTAGATGTGTG
Probe for Locus	BaAK26L11
Locus	k06543
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = expressed protein [Arabidopsis thaliana] pir T45584 hypothetical protein F11C1.220 - Arabidopsis thaliana
Type	PCR
PCR primers	Left 5' - GGCAAACCCGCAATATAGAA Right 5' - TTATCCACCACGGCCATATT
Sequence	BJ457211
PCR size	355