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GrainGenes Marker Report: k06481

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Locus	k06481
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 123.8
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAK30M16
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	SNP = G/A SNP structure (UNICODE) = GTTTACTGCCRAAATTAGCAG Parent 1 SNP sequence = GTTTACTGCCGAAATTAGCAG Parent 2 SNP sequence = GTTTACTGCCAAAATTAGCAG
Probe for Locus	BaAK30M16
Locus	k06481
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = contains similarity to Methanobacterium thermoautotrophicum transcriptional regulator (GB:AE000850) [Arabidopsis
Type	PCR
PCR primers	Left 5' - CGGACAATTTGGTTGTTTCC Right 5' - GGAAGACACGGTGCAAAAAT
Sequence	BJ458129
PCR size	353